Showing 76 open source projects for "c:\program files\micronetics\msmws\program\"

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  • 1
    ProteinShader is a molecular visualization tool that can produce illustrative renderings of proteins that approximate what an artist might create using pen and ink. This free platform-independent program is written in Java and OpenGL Shading Language.
    Downloads: 0 This Week
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  • 2
    IGRAFU is an open source program to integrate solutions to rebuild phylogenetic trees. It supports various well-known algorithms, such as Maximum Parsimony and Distance-matrix methods.
    Downloads: 0 This Week
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  • 3
    This program will read in data generated by ABI DNA Analyzers using GeneScan or GeneMapper, CEQ 2000 and SCF instruments and construct gel images which are straightened and sized. Please download and view the tutorial, no documentation is included in 2.1
    Downloads: 0 This Week
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  • 4
    Our program is made to integrate, analyze and display biological datas typed by the user, such as chemical reactions networks.
    Downloads: 0 This Week
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  • 5
    JPhylo is a Java based visualization program used to display sequences of phylogenetic trees.
    Downloads: 0 This Week
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  • 6
    SOMMS is an analysis program for mass spectra intended for bio-informatics research. Its goal is to relate theoretical spectra with raw data. A previous version, accompanying an article published in Rapid Comm. in Mass Spectrometry, was written in Perl.
    Downloads: 0 This Week
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  • 7
    This program will provide a new way to visualize molecular marker data.
    Downloads: 0 This Week
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  • 8
    2-D chemical structure drawing program
    Downloads: 0 This Week
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  • 9
    The program siRNArules 1.0 can predict active short interfering RNA (siRNA) with a rather high efficiency (see published paper on this in RNA journal). This project aims to develop new versions, siRNArules 2.0 etc.
    Downloads: 0 This Week
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  • 10
    Microarray Explorer (MAExplorer) is a Java microarray data-mining bioinformatics program. It includes data management, graphics, statistics, clustering, reports, gene data-filtering, user written MAEPlugins, documentation, tutorials, demo data.
    Downloads: 12 This Week
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  • 11
    ProteinMusic is a Java program converting DNA sequences into music. The original idea for this project came from R. D. King at the University of Wales, Aberystwyth and C. G Angus from the Shamen (King, R.D. & Angus, C.G. (1996)).
    Downloads: 0 This Week
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  • 12
    SpOK - The Spectrum Organisation Kit, a program for the organisation and visualisation of spectral data written in Java. Sorry - this project is not being continued. All functionality was integrated into the Bioclipse project...
    Downloads: 0 This Week
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  • 13
    Io (ISREC ontologizer) is a program to classify high-throughput genomics data (e.g. microarray results) in the Gene Ontology. Io includes a statistical estimation of the significance of data in the GO nodes and reannotation files for Affymetrix chips.
    Downloads: 0 This Week
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  • 14
    MicroArray Genome Imaging and Clustering Tool (MAGIC tool) is a platform-independant java program for analyzing MicroArray data (.tiff scans & .txt godlists) via graphs and clustering operations (including QT-clustering). http://www.bio.davidson.edu/magic
    Downloads: 1 This Week
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  • 15
    BioGeoTools is a Java based package that is aimed at providing a program and libraries for biogeorgaphy analyses.
    Downloads: 0 This Week
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  • 16
    A command-line program to manipulate annotated genetic sequences (initially in EMBL format). The user supplies a pattern to identify which features or qualifiers to process. These can then be deleted, renamed etc
    Downloads: 0 This Week
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  • 17
    ReadSeq is a program and library for conversion of biosequence data from one format to another, useful in various bioinformatics programs and services. It is written in Java, though an earlier version in C remains available.
    Downloads: 14 This Week
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  • 18
    JKINSHIP: Java open source port of Macintosh Classic Kinship program
    Downloads: 0 This Week
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  • 19
    A Java program to parse chemical names using IUPAC nomenclature. The output can be either a visualisation of the molecule, or in a form for other programs to use (e.g. CML).
    Downloads: 0 This Week
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  • 20
    Jaybird is java-language based, source & xml & codebyte class inter-converting tool. You can write your Envolvable Code with it; You can make your computer write program itself; You can run program without compiling time; You can manage source as data
    Downloads: 0 This Week
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  • 21
    Featurama, superceding ProbePicker, is a bioinformatics program used to generate short probes from large datasets for use in DNA microarray experiments. A new project, BioSap, will extend the functionality of featurama.
    Downloads: 0 This Week
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  • 22
    Info Sapient will be an Open Source, Common License 0.5, 100% Pure Java based program that is a mechanism for the expression and execution of business rules.
    Downloads: 0 This Week
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  • 23
    BioSap-Blast Integrated Oligonucleotide Selection Accelerator Package. BioSap selects unique oligos for microarrays by detecting user-defined parameters and running parallel instances of Featurama and Blast on compute engines, producing xml output files.
    Downloads: 0 This Week
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  • 24
    A small Java program for reading, analysing, viewing and animating the data from an EEG machine during a psychology experiment.
    Downloads: 3 This Week
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  • 25
    This project provides software resources for creating solid models of proteins that can be printed on color 3D printers. The main focus is a java program that reads in a PDB file and produces a PLY format stick representation of the protein.
    Downloads: 0 This Week
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