Showing 292 open source projects for "c:\program files\micronetics\msmws\program\"

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  • 1
    PhyloGrapher is a program designed to visualize and study evolutionary relationships within families of homologous genes or proteins (elements). PhyloGrapher is a drawing tool that generates custom graphs for the given set of elements.
    Downloads: 0 This Week
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  • 2
    Jaybird is java-language based, source & xml & codebyte class inter-converting tool. You can write your Envolvable Code with it; You can make your computer write program itself; You can run program without compiling time; You can manage source as data
    Downloads: 0 This Week
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  • 3
    RmscopII is a Tcl/Tk script responsible to redirect protein structure files (PDB files) or RasMol scripts to multiple RasMol sessions. It can be used as a web browser helper application or as a standalone program.
    Downloads: 1 This Week
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  • 4
    This project aims at creating a program that modelises an idiotypic network. This is a biological phenomenon in the immune system. We want to see how thing will behave by using a graphical library.
    Downloads: 0 This Week
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  • 5
    Featurama, superceding ProbePicker, is a bioinformatics program used to generate short probes from large datasets for use in DNA microarray experiments. A new project, BioSap, will extend the functionality of featurama.
    Downloads: 0 This Week
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  • 6
    Info Sapient will be an Open Source, Common License 0.5, 100% Pure Java based program that is a mechanism for the expression and execution of business rules.
    Downloads: 0 This Week
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  • 7
    BioSap-Blast Integrated Oligonucleotide Selection Accelerator Package. BioSap selects unique oligos for microarrays by detecting user-defined parameters and running parallel instances of Featurama and Blast on compute engines, producing xml output files.
    Downloads: 0 This Week
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  • 8
    A small Java program for reading, analysing, viewing and animating the data from an EEG machine during a psychology experiment.
    Downloads: 3 This Week
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  • 9
    ...DSIM is a project under GPL. DSIM tries to simulate the Darwin theory, by by generating entities, having some characteristics. Those entities belongs to one of the 6 species of the program. Each species has some properties a
    Downloads: 0 This Week
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  • 10
    This project provides software resources for creating solid models of proteins that can be printed on color 3D printers. The main focus is a java program that reads in a PDB file and produces a PLY format stick representation of the protein.
    Downloads: 0 This Week
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  • 11

    motif_counter

    Program to pull out specific motifs from bam sequence files

    Motif counter is a simple bash script that allows users to scan all reads contained in a bam file for a specific motif sequence repeated a number of times. Designed to look for the number of variant telomere repeats and reads in a whole genome sequencing dataset. The program prompts for a character string, and the number of times that string should be present in each read, then pulls out the data. Motifs can either be consecutive or uncoupled from each other across the read, and analysis endpoints include read number and percentage tables, compiled bam files with only motif-containing reads, or bam files with motif-containing reads together with their paired end.
    Downloads: 0 This Week
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  • 12
    QGAMESS is a queuing program for the popular molecule mechnanics program GAMESS, the General Atomic and Molecular Electronic Structure System. QGAMESS is a cross-platform replacement for GTK-Gamess.
    Downloads: 0 This Week
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  • 13
    The program fuses 2 sets of molecules. It tries different relative positions of molecules before binding them, so that there is no or minimal intersection in the resulting molecule. The atom to be fused in a molecule is labeled with an R symbol.
    Downloads: 0 This Week
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  • 14
    Maximal Clique Motif Reduction (MCMR) is a software program for running and then combining the output of multiple motif finder programs, such as MEME, AlignACE and Weeder, into a set of consensus predictions with associated confidence rankings.
    Downloads: 0 This Week
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  • 15
    Python program devoted to study the relationship between cells during inmune response. It is based on a 3D periodic boundary conditions grid where cells see each other and react according to certain movement, growth and interaction rules.
    Downloads: 0 This Week
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  • 16

    Paired Sequence File Comparison

    Fast validation of FASTQ files containing paired-end reads

    For a summary and user's guide, please see the Wiki page: https://sourceforge.net/p/psfc/wiki/Home/ The Wiki page can also be accessed via the top toolbar.
    Downloads: 0 This Week
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  • 17

    Dualword-PMC

    PMC browser

    PubMed Central browser. Source code: http://github.com/dualword/dualword-pmc/
    Downloads: 0 This Week
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