Open Source MATLAB Business Software - Page 2

MATLAB Business Software

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Browse free open source MATLAB Business Software and projects below. Use the toggles on the left to filter open source MATLAB Business Software by OS, license, language, programming language, and project status.

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  • 1

    MS2Browser

    LC-MS/MS data browser designed for siderophore analysis

    MS2Browser is a tool for interactive pre-processing, analysis and visualization of LC-MS/MS data. Input is an mzXML file with centroided LC-MS/MS data. The program is written in MatLab and it was designed for the analysis of siderophores (iron transporting small molecules) in bacterial media. Some of the functionality and use of MS2Browser is described as part as an open-access book chapter: http://www.intechopen.com/books/applications-from-engineering-with-matlab-concepts/small-molecule-lc-ms-ms-fragmentation-data-analysis-and-application-to-siderophore-identification A siderophore structural database assembled for this project can be found alongside the MS2Browser software (.cfw format to be used with ChemBioFinder(TM) ). NOTE: The program is written for personal use to assist siderophore analysis using high-resolution LC-MS/MS data. Please contact me if you have any questions about its use, bugs, etc.
    Downloads: 1 This Week
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  • 2
    Overhead Imagery Research Data Set (OIRDS) - an annotated data library & tools to aid in the development of computer vision algorithms
    Downloads: 1 This Week
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  • 3

    REST4roots

    Evaluation software for shovelomics images

    Root Estimator for Shovelomics Traits (REST) is a software developed for an automated or semi automated high-throughput analysis of root system traits form high quality RGB pictures. Standardized image acquisition is strongly recommended and briefly described in the manual which you can get here for free http://plantscience.psu.edu/research/labs/roots/publications/overviews/next-generation-shovelomics-set-up-a-tent-and-rest
    Downloads: 1 This Week
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  • 4
    A MATLAB package for wavelet analysis of circadian rhythms with both discrete (Daubechies) and continuous (Morlet) wavelets, as well as tools for batch processing of multiple time series, all accessible through a graphical user interface.
    Downloads: 1 This Week
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  • 5
    The purpose of this project is to implement a java program that can show/edit Neural Network objects made in matlab.
    Downloads: 0 This Week
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  • 6
    ATLAS_mPBPK

    ATLAS_mPBPK

    Modeling and Simulation of mPBPK models

    ATLAS mPBPK is a MATLAb-based tool for modeling and Simulation of minimal Physiology Based Pharmacokinetic (mPBPK) models of small and large molecules. The tool enables the users to perform: i) PK data visualization, ii) simulation, iii) parameter optimization, and iv) local sensitivity analysis (SA) of mPBPK models in a simple and efficient manner.
    Downloads: 0 This Week
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  • 7
    AtomProbeLab

    AtomProbeLab

    Matlab-based analysis of Atom Probe Data

    A collection of scripts and functions for the analysis of atom probe tomography data. Currently, this includes: standard file operations, plotting mass spectra, mass spectra analysis and mass peak overlap solving. For more information see the Wiki: https://sourceforge.net/p/atomprobelab/wiki/Home/ Quick overview video: https://youtu.be/8rJHce7M5UU More in-depth video using the APT school demos live script: https://www.youtube.com/watch?v=cyrLHCzZwuw For details of the maximum likelihood method used to solve peak overlaps see the following papers: https://doi.org/10.1017/S1431927616012782 and https://doi.org/10.1017/S1431927618016276 for the quantification of the uncertainty. If you are looking for Dan Haley's "weights" program, go here https://sourceforge.net/projects/apttools/files/extras/
    Downloads: 0 This Week
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  • 8

    CS Miner

    A tool for Navigating in Chemical Space

    CS-Miner stands for Chemical Space Miner and is a software tool for navigating in chemical space of compound databases. It helps for deriving appropriate classification models and performing virtual screening. Download it via: http://csminer.com/csm/?p=7 A quick tutorial is available through: http://csminer.com/csm/?p=8
    Downloads: 0 This Week
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  • 9
    A tool to register and superpose CTF MEG SAM(g2) result and MRI image into one gray-level image.
    Downloads: 0 This Week
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  • 10
    This is the prototype version of software for robust detecting and segmentation of cell nuclei in 3D fluorescence labeled microscopy images. First release coming soon...
    Downloads: 0 This Week
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  • 11
    CDS plots and analyzes output from numerical climate models. It is capable of comparing climate model simulations and/or observational data. It consists mostly of a series of MathWorks Matlab language scripts and reads data in NetCDF format.
    Downloads: 0 This Week
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  • 12
    Visualization and clustering analysis of X-Ray diffraction data from combinatorial thin film libraries.
    Downloads: 0 This Week
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  • 13
    Compilation of Physics Calculators

    Compilation of Physics Calculators

    A compliation of Physics derived claculators

    A NEW GUI VERSION WILL BE RELEASED SOON! Thank you for visiting the Physics Calculator, provided by PIezoSystems Inc., please visit their company website at https://piezosystems.org. For other downloads, please visit our github page, https://github.com/PiezoSystems. We hope that you find this program useful and easy to use, for troubleshooting, please email us, contact@piezosystems.org. If any bugs were found, please email us at bugs@piezosystems.org.
    Downloads: 0 This Week
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  • 14
    A simulator for learning techniques for dynamic bayesian networks.
    Downloads: 0 This Week
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  • 15
    Obsolete project - archived at https://github.com/darrenleeweber/bioelectromagnetism This is a public release of a Matlab toolbox for working with data from electroencephalography (EEG/ERP) and magnetic resonance imaging (MRI). It contains functions to process and visualize ERP/MRI data and associated electrode positions.
    Downloads: 0 This Week
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  • 16

    EXIMS

    EXploring Imaging Mass Spectrometry data

    EXIMS: an improved data analysis pipeline based on a new peak picking method for EXploring Imaging Mass Spectrometry data.
    Downloads: 0 This Week
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  • 17
    FinMetrics - MATLAB based, open source/open architecture quantitative portfolio management environment.
    Downloads: 0 This Week
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  • 18
    Perl module for reading/writing QuickBooks IIF files.
    Downloads: 0 This Week
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  • 19
    Flexible Brain Graph Visualizer

    Flexible Brain Graph Visualizer

    Matlab code to visualise brain graphs from connectivity matrices

    This very configurable script allows you to plot a 3D (MNI space) visualisation of a brain graph, with edges represented by cylinders and vertices represented by spheres. To aid orientation, a cortical mesh can be added, as can convex hull outlines. The colouring and sizing scheme is fully configurable for both edges and vertices. You can see some example output in <http://www.ncbi.nlm.nih.gov/pubmed/22677149> <http://www.ncbi.nlm.nih.gov/pubmed/20541019> <http://www.ncbi.nlm.nih.gov/pubmed/24562717>
    Downloads: 0 This Week
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  • 20

    FluxModules

    Module Computation for Metabolic Networks

    Genome Scale Metabolic Networks are complex systems, Modules help to break them down and hence ease understanding and algorithmic complexity. FluxModules is a toolbox with code for module detection and module visualization.
    Downloads: 0 This Week
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  • 21
    GoIFISH

    GoIFISH

    for the semi-automated analysis of IFISH images

    GoIFISH has been developed for the analysis of IFISH (Immunofluorescence + Fluorescence in situ Hybridisation) images, performing nuclear, membrane and spot detection. Users can manually edit segmentation results, perform background adjustments, construct heatmaps, topology maps, and perform cell classification. All results can be exported for further analysis. GoIFISH has been developed in MATLAB, however binaries are provided to run the program outside of the MATLAB environment. Source code is also available for download. To cite this software: "GoIFISH: A system for the quantification of single cell heterogeneity from IFISH images" Trinh A, Rye IH, Almendro V, Helland A, Russness HG, Markowetz F May 2014
    Downloads: 0 This Week
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  • 22
    HM integration for vessel segmentation
    Human Machine integration for vessel segmentation has as main objective finding precise methods for the segmentation of blood vessels in retinal images, with the main goal of improving screening and diagnosis procedures.
    Downloads: 0 This Week
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  • 23
    ILNumerics.Net
    math lib for .NET. n-dim arrays, complex numbers, linear algebra, FFT, sorting, cells- and logical arrays as well as 3D plotting classes help developing algorithms on every platform supporting .NET. Sources from SVN, binaries: http://ilnumerics.net
    Downloads: 0 This Week
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  • 24
    Herramientas informáticas para auxiliar en el proceso de identificación de parámetros dinámicos en sistemas estructurales. Desde el pre procesamiento hasta la elección y ratificación de modos.
    Downloads: 0 This Week
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  • 25
    This is a collection of different little tools written in MATLAB, JAVA, Python. They all have to to do with Imaging & Microscopy for life science research and related topics or problems. Some of them are meant to be used with ImageJ and MicroManager.
    Downloads: 0 This Week
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