Showing 72 open source projects for "sandbox:/mnt/data/project_plan.pod"

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  • 1

    CS Miner

    A tool for Navigating in Chemical Space

    CS-Miner stands for Chemical Space Miner and is a software tool for navigating in chemical space of compound databases. It helps for deriving appropriate classification models and performing virtual screening. Download it via: http://csminer.com/csm/?p=7 A quick tutorial is available through: http://csminer.com/csm/?p=8
    Downloads: 0 This Week
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  • 2
    Visualization and clustering analysis of X-Ray diffraction data from combinatorial thin film libraries.
    Downloads: 0 This Week
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  • 3

    FluxModules

    Module Computation for Metabolic Networks

    Genome Scale Metabolic Networks are complex systems, Modules help to break them down and hence ease understanding and algorithmic complexity. FluxModules is a toolbox with code for module detection and module visualization.
    Downloads: 0 This Week
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  • 4
    A Matlab based project for tracking cell nuclei in 3D space over time from live imaging data. (Sample images and lineage data are available under "Files".)
    Downloads: 0 This Week
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    Securden Privileged Account Manager

    Unified Privileged Access Management

    Discover and manage administrator, service, and web app passwords, keys, and identities. Automate management with approval workflows. Centrally control, audit, monitor, and record all access to critical IT assets.
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  • 5
    mVision library is a set of functions related with computer vision programmed in Matlab. Also include a couple of GUIs for test visually the functions.
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  • 6
    Commodity class to facilitate interaction between MATLAB and Bitplane Imaris via COM or ICE interface.
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  • 7
    LAVA for AFM

    LAVA for AFM

    Lloyd's Algorithm-based Volumetric Analysis for AFM Images

    This MATLAB-based program enables analysis of AFM images. In particular, it allows the user to measure the volume of all distinguishable features in an image and to isolate and sort those particles. As the name implies, LAVA uses Lloyd's Algorithm, also known as k-means sorting, to identify a small set of volumes representative of the actual distribution of particle in the image. Although developed for determining feature volume, LAVA is also completely compatible with other types of...
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  • 8
    Malimpa stands for MAtlab Library for IMage Processing and Analysis. It provides functions for 2D/3D grascale/color image creation, filtering, or measurement. It requires, and complements Matlab Image Processing Toolbox. Important notice: the project is now hosted in GitHub, https://github.com/dlegland/matImage
    Downloads: 0 This Week
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  • 9
    This is the prototype version of software for robust detecting and segmentation of cell nuclei in 3D fluorescence labeled microscopy images. First release coming soon...
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  • 10
    flNeuronTool

    flNeuronTool

    A Fast Light Neuron Tracing and Editor Tool

    The flNeuronTool allows users to reconstruct and proofread neuronal morphologies in light microscopy images. The system incorporates automatic tracing and manual editing of neuron reconstruction into a cooperative 3D interactive visualization-assisted environment, which is a powerful tool for analysis of complex neuronal images.
    Downloads: 0 This Week
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  • 11
    Matlab tool for plotting multi-channel biomedical signals. It is designed for researchers on both engineering and medicine who have to collaborate to visualize and analyze signals. It is the ideal tool to plot electroencephalogram (EEG), Foetal Heart Rate (FHR) and many other signals with the standard tools used in clinical routine.
    Downloads: 1 This Week
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  • 12
    A set of tools for tactile display of Matlab graphs using haptic (force feedback) devices.
    Downloads: 0 This Week
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  • 13

    MPH to Tecplot

    Converts 3-D COMSOL mph file to a Tecplot compatible file

    The MATLAB m.file will export data contained within a 3-D COMSOL mph file to a datafile in the format of an ascii TECPLOT file. The underlying engine for this export is the COMSOL - "LiveLink for MATLAB" module, with Matlab as the manager for the file import and export.
    Downloads: 2 This Week
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  • 14
    HM integration for vessel segmentation
    Human Machine integration for vessel segmentation has as main objective finding precise methods for the segmentation of blood vessels in retinal images, with the main goal of improving screening and diagnosis procedures.
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  • 15
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  • 16
    A MATLAB package for wavelet analysis of circadian rhythms with both discrete (Daubechies) and continuous (Morlet) wavelets, as well as tools for batch processing of multiple time series, all accessible through a graphical user interface.
    Downloads: 0 This Week
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  • 17
    STI analysis and forecasting

    STI analysis and forecasting

    Analysis of drug resistance and epidemiology of STI (STD) in Russia

    The STIanafor is a tool for spatio-temporal data vizualization, analysis and forecast of incidence of sexually-transmitted diseases and drug resistance of pathogens in the Russian Federation. Currently supports gonorrhoea (N. gonorrhoeae) and syphilis (T. pallidum). A set of real data for testing is provided.
    Downloads: 0 This Week
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  • 18
    NF2FF
    NF2FF is a MATLAB script, which implements a near field to far field transformation for near field antenna measurement setups.
    Downloads: 2 This Week
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  • 19
    MATLAB GUI and code to map cell distribution around smooth spherical microcarriers beads from laser scanning confocal microscope images
    Downloads: 0 This Week
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  • 20

    MVPaa

    THIS PROJECT HAS MOVED!

    MVPaa has merged into the automatic analysis project on gihub: https://github.com/rhodricusack/automaticanalysis -- MVPaa is a MVPA (Multi-Voxel Pattern Analysis) package made for the automatic analysis (http://www.cambridgeneuroimaging.com/aawiki) package.
    Downloads: 0 This Week
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  • 21
    Open Source Particle Image Velocimetry

    Open Source Particle Image Velocimetry

    Open Source Particle Image Velocimetry and PIV Analysis

    OpenPIV is an initiative of scientists to develop a software, algorithms and methods for the state-of-the-art experimental tool of Particle Image Velocimetry (PIV) which are free, open source, and easy to operate.
    Downloads: 0 This Week
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  • 22
    A tool to register and superpose CTF MEG SAM(g2) result and MRI image into one gray-level image.
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  • 23
    Nounou is a Java library for handling optical imaging data. The core consists of a modular stream of "filter blocks" that each modify or display the data. It is easily called from Mathematica and Matlab, for advanced figure output.
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  • 24
    This toolkit allows complete control of a microscopy setup from Labview, Matlab, Scilab, Python, .Net, VB, IgorPro, Mathematica and more. Included is a standalone program for image acquisition and scripting control of a scientific microscope.
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  • 25
    Tool for visualizing artificial neural networks in Matlab using the Matlab Neural Network Toolbox (see wiki for details).
    Downloads: 0 This Week
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