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Parsers for biological data based on scanner generators like Flex (C), Re2c(C), Jflex (Java) and Ifickle (Tcl). This scanner generators are providing easier maintainance, development and higher speed than hand written scanners. Scanner output is SQL.
Methods and testing of methods for automatic analysis of in situ cyclic
voltammetry data.
This, at least initially, is the code from my masters thesis, which was
done as a contribution to a larger project called Aevum. Aevum is being
developed at t
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With the "xix" library, GATE functionality is available in XQuery (via an MXQuery extension). OpenCalais invocation is supported, too. -- Source code at http://sgv-jenkins-01.ethz.ch/job/xixlib/ws/-- "Show project details" for instruction
IMPORTANT: The flosslogic project has merged with the sigrok project. Development continues in the sigrok wiki, mailing lists, IRC channel, and git repository.
* Java classes for parsing text, conversion to XML or to evaluate in Java. The parser is textual-script-controlled with a syntax near Backus Naur Format, named ZBNF. * Some routines for conversion: C-Header or Java to XMI, XML-Documentation generation,
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An implementation of the Markovian Jensen Shannon divergence (MJSD). The code recursively segments a sequence of symbols and then assesses the divergence of each segment with respect to the entire sequence.
Now part of Apache's Mahout machine learning project at http://mahout.apache.org/-- please see there for latest info and code and releases and support!
Actionscript 3 classes currently for easily loading images, movies, with panning, slideshow and other effects. Includes a useful logging class. Also AS2 code for financial charts, pie charts, node graphs, etc. Also AS2/JS classes for stats/data handling.
...Instead of a "large grid of cells and scattered formulas", the Objectsheet uses finite-sized tables, Javascript objects, and templated formulas, formats, and styling, where you can easily add functionality using javascript code.
Java package to study a clustering model described in the paper \"Novel Clustering Algorithm Based Upon Games on Evolving Network\" by Q. Li, Z. Chen, Y. He and J-P. Jiang (in arxiv: http://arxiv.org/pdf/0812.5064v1), generalizations and similar issues.
iScore measures the interestingness of news articles in a limited user environment. It is an online learning algorithm that combines a large set of disparate features to classify documents. To download the source code, please use subversion.
R2HTML is a package for R, which includes HTML function and methods to output R objects to HTML. Allow for redirection on the fly. A driver for Sweave allows to parse HTML flat files containing R code and to automatically write the corresponding outputs.
Parallel IBDWS is an upgrade from IBDWS that utilizes parallel processing. Also, the incorporation of DNA sequence data has been added since the last code release
febrl-gen is a Java-based frontend to Febrl, an open-source data linkage system written in Python. Users can configure the parameters of a linkage project through the frontend, and febrl-gen will generate a Febrl-ready configuration file.
Poor Man's HPC is a framework that allows distributing and running code on a server farm. pmHPC is a scaled down and simplified version of distributed computing projects such as SETI, so is a perfect fit for enthusiasts and universities.
A code for fast multi-dimensional density estimation . Instead of assuming an a-priori metric definition, it calculates a locally adaptive metric for each data point by using, a Shannon Entropy based, binary space partitioning scheme.
K-automaton is a new parsing (syntactic analysis) machine isomorphous to language. Implemented in Java. Can generate Java code from grammars described in EBNF.
RITCode is an analysis tool for captured eye tracker video files. It allows the scientist to analyze eye movements and characteristics of the scene. It has been created by the Rochester Institute Of Technology Visual Perception Lab.