Search Results for "/storage/emulated/0/android/data/net.sourceforge.uiq3.fx603p/files" - Page 5

Showing 179 open source projects for "/storage/emulated/0/android/data/net.sourceforge.uiq3.fx603p/files"

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  • 1

    StochDecomp

    User Manual describing theory behind the package, installation instruc

    ...We also demonstrate and exemplify using the JAK-STAT signalling pathway that it is possible to infer noise contributions resulting from individual reactions directly from experimental data. This is the first computational tool that allows to decompose noise into contributions resulting from individual reactions.
    Downloads: 0 This Week
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  • 2

    RCFPD

    Random Collection of Functions for Proteomics Data Analysis

    An R package for distribution of data analysis functionality used by the Proteomics Core at Weill Cornell Medical College in Qatar.
    Downloads: 0 This Week
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  • 3

    nwbas2ecce

    nwbas2ecce converts nwchem basis set files to the ECCE format

    ...In addition, many of the newer basis sets that come with nwchem aren't included, such as the def2- series. nwbas2ecce is a python script that aims to automate as much as possible of the conversion process of a nwchem basis set file into the files necessary for ECCE to included it in the basis set tool. The process isn't completely automatic, but I also believe that it shouldn't be to avoid stuff-ups -- however, the amount of manual editing is kept to a minimum. Note that these script are run in the terminal. The screenshot is of the basis set tool in ECCE, not this piece of software.
    Downloads: 0 This Week
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  • 4
    ...The installation procedure differs slightly according to your system; but this should remain simple. Have a look at the readme file when you download your new copy from https://sourceforge.net/projects/rawgeno/files/rawgeno/RawGeno%202.0-1/ Make also sure to have a look at https://sourceforge.net/projects/rawgeno/files/ where you can find a detailed manual, demo datasets and many demo scripts.
    Downloads: 0 This Week
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  • 5
    gbview
    is a interactive molecular visualisation program designed especially designed for coarse-grained simulation of non-spherical particles. Ellipsoids (Gay-Berne), disks, and custom shaped uniaxial particle (e.g. pear-shaped particles) can be represented.
    Downloads: 0 This Week
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  • 6
    NaRIBaS

    NaRIBaS

    Unix-based preparation and analysis toolbox for molecular simulations

    ...Task specific input and preparation or analysis function, are easy expandable to meet the scientific characteristic of constant changing properties. Concepts for efficiently storing and analysing large files in conjunction with graphical visualization and numerical data processing are presented in a Manual. A documented script collection that allows reproducing all simulations and analysis results presented in the Doctoral thesis of the author.
    Downloads: 0 This Week
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  • 7
    This is a Matlab software package for single molecule FRET data analysis.
    Downloads: 1 This Week
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  • 8
    TreQ

    TreQ

    Indel-tolerant Read Mapper

    TreQ aims at mapping reads from next generation sequencing (NGS) data to a reference genome, with emphasis on accuracy in the presence of structural variations like insertions and deletions.
    Downloads: 0 This Week
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  • 9
    The Self-Organizing Map Maker for Education and Research. Features include 3D-visualization of the training process, various 2D and 3D map topologies, easy extensibility to additional topologies.
    Downloads: 0 This Week
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  • 10
    Screening Assistant 2
    ScreeningAssistant 2 is a modular software dedicated to perform various simple and advanced chemoinformatics analysis around chemical libraries.
    Downloads: 1 This Week
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  • 11

    u/sbmv2012

    Taxonomy assignment of metazoans using a python based pipeline

    The aim of this project is to create an automated pipeline for taxonomic assignment of DNA sequences obtained from environmental samples. We develop a series of python scripts to process the raw sequence data obtained from benthic environmental samples and to taxonomical assignment of these sequences and finally to integrate all data in a relational database.
    Downloads: 0 This Week
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  • 12
    ...Selbst im vereinfachten zweidimensionalen HP-Modell (hydrophob/polar) ist die Proteinfaltung bereits NP-vollständig. Hier implementieren wir einen brute-force Algorithmus zur Lösung kurzer Eingabesequenzen (0-1-Bitstrings) für die Proteinfaltung. Spende einen Cappuccino: Bitcoin: 1HqrdnfQgi9B4LW8UEvLAwh7X5gXPCoQ5B Litecoin: LeCx44jGjHxiVZ8f6MyumLTCxPcp3ePKJT Paypal: paypal.me/GerritLeder
    Downloads: 0 This Week
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  • 13
    Burrow-owl is a software package for visualizing multidimensional nuclear magnetic resonance (NMR) spectra, with an emphasis on spectra used in macromolecular structure determination.
    Downloads: 0 This Week
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  • 14

    xyz2eps

    python command line utility to print xyz-geometry to eps file format.

    xyz2eps.py is an command line utility written in Python programing language which prints the geometry from xyz-file directly to the eps-file format. Originally it was designed to study the problems related to grain boundaries in graphene.
    Downloads: 0 This Week
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  • 15
    A fast efficient way of dealing with large amounts of Blast or Repeatmasker data.
    Downloads: 0 This Week
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  • 16
    PyBact is an open source software written in Python for Bacterial Identification. The software generates simulated data matrix which accurately represents the probabilistic positive/negative results of the tested biochemical test.
    Downloads: 0 This Week
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  • 17
    A GUI program to create the plasmid database forms for BGME lab. This program presents user with a data entry form for entering plasmid information and automatically converts DNA sequence to protein, aligns it, and creates text output file.
    Downloads: 0 This Week
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  • 18
    The Parenthesis Classifier takes the contents of a set of parentheses and classifies it into one of several categories. It includes a parenthesized-data extractor and the classifier.
    Downloads: 0 This Week
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  • 19
    Databases to aid Metabolomics projects providing storage functionality for raw and preprocessed data, and integration with existing data analysis environments.
    Downloads: 7 This Week
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  • 20
    The Generic Genetic Studies Database (GGSD) is a web-based, relational database driven data management software package for the management of large scale genetic studies.
    Downloads: 0 This Week
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  • 21
    The TIMTAM (Target Information Management Tracking And More) system implements a secure knowledgebase supporting the management, tracking, and analysis of experimental data associated with structural biology projects.
    Downloads: 0 This Week
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  • 22
    PAICE is a rapid bioinformatics pathway visualization tool for KEGG-compatible accessions derived from Illumina Solexa next-gen and Affymetrix datasets. It colors KEGG pathways while appreciating detection-calls and duplicate gene copies.
    Downloads: 0 This Week
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  • 23
    This is a set of scripts that helps with processing of NMR pH titration data. These scripts allow for fitting (using R) and plotting of data of multiple residues. The program needs to be made more user friendly.
    Downloads: 0 This Week
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  • 24
    PySpline is a graphical, cross-platform program for processing X-ray absorption spectroscopy (XAS) and Extended X-ray absorption fine structure (EXAFS) data. It allows processing parameters to be adjusted and observe the effect on R-space data.
    Downloads: 0 This Week
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  • 25
    ChemAzTech
    ChemAzTech is a Web chemistry software (for Linux server) connected to a MySQL database (L.A.M.P. software) which is storing molecules. Manage your chemical database, with product's properties. Draw, edit molecules and record it !
    Downloads: 0 This Week
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