Search Results for "/storage/emulated/0/android/data/net.sourceforge.uiq3.fx603p/files" - Page 99
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Showing 6235 open source projects for "/storage/emulated/0/android/data/net.sourceforge.uiq3.fx603p/files"
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phcfM
R package for modelling anthropogenic deforestation
...It was named after the REDD+ pilot-project 'programme holistique de conservation des forêts à Madagascar'. phcfM includes two main functions: (i) demography(), to model the population growth with time in a hierarchical Bayesian framework using population census data and Gaussian linear mixed models and (ii) deforestation(), to model the deforestation process in a hierarchical Bayesian framework using land-cover change data and Binomial logistic regression models with variable time-intervals between land-cover observations. The two functions use embedded Gibbs samplers written in C++ with the Scythe statistical library to reduce computational time. -
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q pipeline manager
q: integrated platform for pipeline configuration and management
...Pipelines are constructed from modular script files, with job definitions and results stored in easily retrieved job files. A web interface facilitates job submission and monitoring, with the complete pipeline exportable for full transparency. -
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EqualX
The LaTeX Equation Editor
EqualX makes you easily write equations in LaTeX and preview them in real-time. repository: https://gitlab.com/q-quark/equalx -
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JCycles
[frozen] A library for computing cycles in graphs or in Java code.
[This project is frozen, but has an offspring with more features: https://github.com/jeffhain/jadecy ] JCycles provides treatments to compute cycles, or just strongly connected components, in directed graphs in general, or in classes or packages dependencies graphs parsed from class files (major version <= 51, else does best effort). It uses Tarjan's algorithm for SCCs, and Johnson's for cycles, with continuations instead of recursion, which allows to handle large graphs (< Integer.MAX_VALUE vertices). Requires Java 5 or later. -
DataHub is the leading open-source data catalog helping teams discover, understand, and govern their data assets.Built on an open source foundation with a thriving community of 13,000+ members, DataHub gives you unmatched flexibility to customize and extend without vendor lock-in. DataHub Cloud is a modern metadata platform with REST and GraphQL APIs that optimize performance for complex queries, essential for AI-ready data management and ML lifecycle support.
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TSPLib.Net
TSPLib wrapper for .Net
TSPLib is a set of Traveler Salesman and related graph problems gathered by the Heidelberg university. This project provides .Net library wrapping up library files loading code, implements distance functions and all the TSPLib features. If you'd like to test your graph tour searching algorithm on a TSP lib will save you hours of reading in a data and adjusting your code to ensure that result are comparable. Delivering as a dll with .Net wrapper and a zip archive with all the original data files from TSPLIB95. ... -
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fqzcomp
A fastq compression program
Fqzcomp is a basic fastq compressor, designed primarily for high performance. Despite that it is comparable to bzip2 for compression levels. -
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DNAA is the DNA analysis package, for analyzing next-generation post-alignment whole genome resequencing data. Specifically, DNAA is able to find structural variation, SNP and indel variants, as well as evaluating the mapping and data quality.
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Leeds Census Tool
Using Excel 2010 and VBA to create a data reporting tool for Leeds
Excel allows the simple creation of reports and tables, this project is to create an API for the manipulation of Census and other data in such a way that customizable reports and tables can easily be generated for any (and aggregated) geographies from Census and other available data. -
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cy2fluxviz
cy2fluxviz : Cytoscape 2 plugin for flux distribution visualization
cy2fluxviz - Cytoscape 2 Plugin for the visualization of flux distributions in networks. Latest releases from https://github.com/matthiaskoenig/cy2fluxviz -
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EXCAVATOR-tool
Tool for detecting CNVs from whole-exome sequencing data
...We recently published on BMC Genomics a novel software package, named XCAVATOR, for the identification of CNVs/CNAs from short and long reads whole-genome sequencing experiments (https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-017-4137-0). XCAVATOR is freely available at http://sourceforge.net/projects/xcavator/. EXCAVATOR is a novel software package for the detection of copy number variants (CNVs) from whole-exome sequencing data. EXCAVATOR has been published on Genome Biology (http://genomebiology.com/2013/14/10/R120/abstract). #################### ATTENTION!!!!! ... -
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TreeBASE is a database and web front end that stores phylogenetic trees and the data matrices used to generate them. The current iteration comprises a complete rewrite of the schema and web layer, and will include a web services layer.
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xfer9860 works with the fx-9860G (AKA Graph85) versions of Casio's graphing calculators. It allows you to transfer files to your calculator, and works on platforms where libusb is available - including Linux and Windows.
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SimAssem
For processing and/or simulating species assemblage data.
...Assemblages are simulated by specifying the: 1) number of species, 2) total abundance of individuals, 3) abundance distribution, 4) spatial configuration, 5) species detection probabilities, 6) survey design, and 7) number of grid cells to survey (out of a square grid comprised of 10,000 cells). SimAssem also processes existing encounter data and formats existing and simulated encounter data for other programs. SimAssem, along with the open source code, will hopefully give researchers and managers a tool for assessing the development of new estimators and evaluating potential decisions in a simulated environment. More information on SimAssem is given in Chapter 2, 'SimAssem: a program for simulating species assemblages and estimating species richness', in the dissertation 'Simulating species assemblages and evaluating species richness estimators'. -
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CARuler
qwt draggable graph rulers
CARuler provides vertical and horizontal ruler classes designed to work with QwtPlot. You can create as many rulers as you like. During construction, the ruler gets attached to the plot. Thus, the plot takes ownership of all rulers known to it. Rulers are draggable and emit a signal when its position changes. There is a built-in editing facility for ruler attributes in the form of a right click menu. It is also possible, through the right click menu, to lock any ruler in its current... -
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"ncdr2cnc" - N/C Drill to CNC code (G-Code) is the simple utility, which converts N/C drill files to G-Code files (adopted to Turbo CNC).
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cmotif
A method for mining conditional phosphorylation motifs
...Although several algorithms have been proposed to uncover phosphorylation motifs, the problem of efficiently discovering a set of significant motifs with sufficiently high coverage and non-redundancy still remains unsolved. In this paper, we propose an algorithm called C-Motif for a non-redundant identification of significant phosphorylation motifs. In tests with real data including both non-kinase-specific and kinase-specific phosphorylation data, the C-Motif algorithm successfully reports a relatively complete set of of conditional phosphorylation motifs efficiently. -
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FALCON - Text Search Java Project
JSON based text search Java Project
----------------- - What is it? - ----------------- The "Falcon Search" is a JAVA API and tool to search inside the documents. It was originally started to search the content in pdf files under the project "HAWK Search". Searching with this tool is query-based not word-based as in most of the document search tools OR document readers. It also takes care of jumbling of words within query and spelling mistakes. Commonly used techniques in this project are Natural Language Processing, Information Extraction and Question-Answering Architecture. ---------------------- - Latest Version - ---------------------- Details of latest version can be found on project website - http://geekdadaji.com --------------------------- - CONTACT DETAILS - --------------------------- CREATOR : SWAPNIL A JADHAV (saj1919) EMAIL ID : dadajibudhau@gmail.com WEBSITE : http://geekdadaji.com LICENSE : CC BY-NC 4.0 -
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Geomview
an interactive 3D viewing program
Geomview is an interactive 3D viewing program for Unix. Geomview lets you view and manipulate three- and higher-dimensional objects, and can also be used as a display engine by other programs to animate objects. Geomview supports OpenGL and uses a Motif X interface. -
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caplib
Correct, translate and analyze combinatorial library sequencing data
Originally developped to handle PacBio CCS data for an AAV capsid library. This program will extract, correct, translate and analyze the sequencng data, starting from the CCS fastq file. -
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A math application written in Java. Its features include 2D and 3D graph plotting, scripting, user-defined variables and functions and skinnable GUI. This project is not maintained at the moment.
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basecv
BCV is DNA base caller with vocabulary
The Base Calling with Vocabulary (BCV) software package is intended for analysis of direct (population) sequencing chromatograms using known vocabulary sequences similar to the target DNA. The current version of BCV can only process chromatogram files obtained on Applied Biosystems capillary sequencing machines (ABIF file format). -
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DimerRemover
Remove adapter dimers from NGS data
This program can be used to count or remove adapter dimers in fastq files. Using a provided adapter sequence, it generates variations of this sequence and stores them in a hash table. The reads can then be directly matched against the hash. It is far more time efficient than doing alignment. -
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Cotovía
Text-to-Speech System for Galician and Spanish
...Cotovía has been developed as a research project, therefore most of the work has been focused on the most interesting aspects from a scientific point of view. Although the performance of the whole TTS system is quite good, there are some parts that could be clearly improved. Cotovia files and installing instructions are available at the Files and Git sections. -
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obstbaumpate
Obstbaum Verwaltung
Mit dem Obstbaumpaten lassen sich einfach Obstbäume an Wegesrändern verwalten.
