Search Results for "c:\program files\micronetics\msmws\program\" - Page 21

Showing 1783 open source projects for "c:\program files\micronetics\msmws\program\"

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  • 1

    runjags

    The 'runjags' R package and standalone JAGS extension module

    This package provides high-level interface utilities for MCMC models via Just Another Gibbs Sampler (JAGS), facilitating the use of parallel (or distributed) processors for multiple chains, automated control of convergence and sample length diagnostics, and evaluation of the performance of a model using drop-k validation or against simulated data. Template model specifications can be generated using a standard lme4-style formula interface to assist users less familiar with the BUGS syntax. A...
    Downloads: 1 This Week
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  • 2
    BayesRate

    BayesRate

    Bayesian estimation of diversification rates

    BayesRate is a program to estimate speciation and extinction rates from dated phylogenies in a Bayesian framework. The methods are described in: Silvestro, D., Schnitzler, J. and Zizka, G. (2011) A Bayesian framework to estimate diversification rates and their variation through time and space. BMC Evolutionary Biology, 11, 311 Silvestro D., Zizka G. & Schulte K. (2014) Disentangling the effects of key innovations on the diversification of Bromelioideae (Bromeliaceae).
    Downloads: 0 This Week
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  • 3

    nexbridge

    Makes Celestron mounts controlable over the network

    This this program transparently proxies the serial commands supported by the Celestron NexStar hand control over the network, so that the telescope can be controlled over the network. It is recommended to be used with libnexstar or NexStarCtl on the remote end. However it proved to be very useful for exporting all kinds of telescope mounts on the network like Sky-Watcher, Meade etc.
    Downloads: 0 This Week
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  • 4

    Kaidacity

    Acoustic Analysis LV2 Plugins

    Cross-Platform Acoustic Analysis LV2 Plugins intended for use in Audacity. At first this will include calculation of typical acoustic parameters from wav files and will hopefully extend into room acoustic analysis.
    Downloads: 0 This Week
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  • 5
    AvrGui jest to program, który zajmuje się kompilacją i programowaniem kontrolerów. Wykorzystuje on kompilator avr-gcc. Zastosowanie biblioteki Qt umożliwia prace programu zarówno na systemach Linux, jak i windows.
    Downloads: 0 This Week
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  • 6

    3d axisymmetric heat diffusion C code

    A C Program code to solve for Heat diffusion in 3D Axi-symmetric grid.

    Type - 3D Grid - Axisymmetric Case - Heat diffusion Method - Finite Volume Method Approach - Flux based Accuracy - First order Scheme - Explicit Temporal - Unsteady Parallelized - No Inputs: [ Length of domain (LR,LZ,LH) Time step - DT Material properties - Conductivity (k or kk) Density - (rho) Heat capacity - (cp) Boundary condition and Initial condition. ] Setup - Periphery heated to 500 C Top to 500 C Bottom to 500 C
    Downloads: 0 This Week
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  • 7

    2d axisymmetric heat diffusion C code

    A C Program code to solve for Heat diffusion in 2D Axi-symmetric grid.

    Type - 2D Grid - Axisymmetric Case - Heat diffusion Method - Finite Volume Method Approach - Flux based Accuracy - First order Scheme - Explicit Temporal - Unsteady Parallelized - No Inputs: [ Length of domain (LR,LZ) Time step - DT Material properties - Conductivity (k or kk) Density - (rho) Heat capacity - (cp) Boundary condition and Initial condition. ] Setup - Periphery heated to 200 C Top to 300 C Bottom to 100 C
    Downloads: 0 This Week
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  • 8

    denovo_hit

    Outputs potential denovo variants from VCF given pedigree information.

    Program takes variants calls and determines if the call is novel for a child compared to parents. Program can handle both annotated and unannotated VCF files, however output file is not compatible with GATK's snpEff, so you should annotate prior to using denovo_hit. Usage: ./denovo_hit <VCF file> <PED file> Output: ./potential_denovo.txt To compile: g++ -std=c++11 denovo_hit.cpp -o denovo_hit Please see files for example VCF file, and pedigree file. ...
    Downloads: 0 This Week
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  • 9

    REDO

    REDO - RNA Editing Detection in Organelle

    REDO is a comprehensive application tool for identifying RNA editing events in organelles based on variant call results (VCF files). It is a suite of Perl scripts and can work easily and directly in any operating system installed Perl and R Environment. The stringent rule depended filters and statistical filters are used in REDO for reducing false positive rate. It can provide detailed annotations, statistics and figures for RNA editing sites. REDO also can detect RNA editing events in...
    Downloads: 0 This Week
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  • 10
    Buildes

    Buildes

    A designer’s program for describing parts of the building

    Buildes is an integrated development environment that assists the user in creating building information. It reads a text (session) file from which it compiles the information. It then allows the user to browse, analyze and export the resulting building knowledge. The compilation system is written in pure Python. The building components created are rendered in PythonOCC. The GUI is written using PyQt.
    Downloads: 0 This Week
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  • 11

    3d Heat conduction C code

    A C Program code to solve for Heat conduction in 3D Cartesian grid.

    Type - 3D Grid - Structured Cartesian Case - Heat Conduction Method - Finite Volume Method Approach - Flux based Accuracy - First order Scheme - Explicit Temporal - Unsteady Parallelized - No Inputs: [ Length of domain (LX,LY,LZ) Time step - DT Material properties - Conductivity (k or kk) Density - (rho) Heat capacity - (cp) Boundary condition and Initial condition. ] Setup : The six boundaries are heated to 100 C, 200 C, 300 C, 400 C, 500 C and 600 C respectively.
    Downloads: 1 This Week
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  • 12

    3d heat conduction parallelized

    MPI based Parallelized C Program code to solve for 3D heat conduction.

    Type - 3D Grid - Structured Cartesian Case - Heat conduction Method - Finite Volume Method Approach - Flux based Accuracy - First order Scheme - Explicit Temporal - Unsteady Parallelized - Yes Inputs: [ Length of domain (LX,LY,LZ) Time step - DT Material properties - Conductivity (k or kk) Density - (rho) Heat capacity - (cp) Boundary condition and Initial condition. ] Setup : The six boundaries are heated to 100 C, 200 C, 300 C, 400 C, 500 C, 600 C respectively.
    Downloads: 0 This Week
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  • 13
    orbkit (Moved to Github)

    orbkit (Moved to Github)

    A Modular Python Toolbox for Cross-Platform Post-Processing of Quantum

    PLEASE NOTE ORBKIT HAS BEEN MOVED TO https://github.com/orbkit/orbkit orbkit is a parallel Python program package for post-processing wave function data extracted from output files of MOLPRO (Molden File Format), TURBOMOLE (AOMix file format), GAMESS-US, PROAIMS/AIMPAC (wfn/wfx file format), and Gaussian (Output File and Formatted Checkpoint File) output files. Futhermore, an interface to cclib, a parser for quantum chemical logfiles, is provided.
    Downloads: 0 This Week
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  • 14

    RGAAT

    Reference based genome assembly and annotation for new genome

    This program can assemble and/or annotate genome for new genome and known genome upgrade using sequence alignment file (SAM or BAM format), sequence variant file (VCF format or five coloum table (tab-delimited, including chromosome, position, id, reference allele and alternative allele)) or new genome sequence file (FASTA format) based on reference genome sequence file (FASTA format) and annotation file (TBL, GTF, GFF, GFF3 or BED format).
    Downloads: 0 This Week
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  • 15

    Fielddata Mgr

    Land survey field crew data management for .RAW and .JOB file types.

    ...Each day, the .RAW file is copied to the appropriate chiefs folder and when Fielddata Mgr is run, or the reload button is clicked, all .RAW files are listed along with a long list of all job folders existing in a designated location, and a short list of frequently accessed jobs that are selected from within the long list. When a .RAW file is selected, the contents are read, interpreted, and the results displayed within the program window. For remaining information please read the info sht.
    Downloads: 0 This Week
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  • 16
    Toss is a program which allows to explore the use of logic and terms in various models. On the static side, you can draw graphs and check their properties, axioms and reductions. Then, on the dynamic side, you can model multi-player games with both discrete and continuous dynamics. You can play the games, generate strategies automatically and analyse possible behaviours with respect to various logic formulas.
    Downloads: 0 This Week
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  • 17
    openCarac

    openCarac

    openCarac : Automatize your Spice simulator runnings

    openCarac aims to automatize the characterization of electronic circuits using your favourite Spice simulator and provide output files in HTML, LaTeX (c) and GNU Octave (c) scripts. openCarac is natively compatible with various simulators including: - Ngspice (c), http://ngspice.sourceforge.net - Gnucap (c), http://gnucap.org/dokuwiki/doku.php?id=gnucap:start - Xyce (c), http://xyce.sandia.gov It comes with an API which permits to add other features and extend openCarac compatibility; openCarac is also TCL package and comes with functions that can be called in any TCL script. ...
    Downloads: 0 This Week
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  • 18
    lxnstack

    lxnstack

    A program to align and stack astronomical images.

    Lxnstack is a program designed to align and stack astronomical images (both planetary and deep-sky). The features of latest version are: * Several stacking methods (average, median, sigma-clipping, ...) * Two automatic align method: align-points; phase correlation, * One manual align method. * sub-pixel precision (0.1 pixel for phase correlation and 0.01 pixel for manual alignment)
    Downloads: 0 This Week
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  • 19
    The Systems Biology Results Markup Language is a language describing data. Unlike flat data formats, SBRML allows describing the origin of the data as well. This project hosts a library and tools for using SBRML.
    Downloads: 0 This Week
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  • 20

    skewer

    A fast and sensitive adapter trimmer for illumina paired-end sequences

    This program implements a novel dynamic programming algorithm dedicated to the task of adapter trimming and it is specially designed for processing illumina paired-end sequences.
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    Downloads: 4 This Week
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  • 21
    siccom

    siccom

    Spatial Interaction in Coral Reef Communities

    The program allows the simulation of spatial dynamics in a benthic coral reef community under various environmental settings. Several coral species, with either massive or branching colony growth morphologies are implemented as individual colonies, which compete for space with each other as well as with macroalgae and algal turf. For more details on the first version of the program see also: Kubicek A, Muhando C, Reuter H (2012) Simulations of Long-Term Community Dynamics in Coral Reefs - How Perturbations Shape Trajectories. ...
    Downloads: 0 This Week
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  • 22
    Cross-platform application aimed at helping users to learn vocabulary from any foreign language(s). Add/Edit/Delete vocab words (w/ translation, category, sentence, notes, picture). Review (Quiz) vocabulary words.
    Downloads: 0 This Week
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  • 23

    Py3DN

    Morphometric analysis and visualization of the 3D structure of neurons

    ...Above all, it provides a flexible environment where new types of analyses can be easily set up allowing total freedom to test new hypotheses. The application was developed in Python and uses Blender (an open source program) to produce detailed 3D representations of raw and processed data. Py3DN is described in the paper: Aguiar P et al, "Versatile morphometric analysis and visualization of the three-dimensional structure of neurons", Neuroinformatics, 2013, 11(4):393-403 doi: 10.1007/s12021-013-9188-z
    Downloads: 0 This Week
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  • 24

    fast_count_multi

    Extremely fast NGS read counter

    Counts NGS read alignments against GTF annotations in a multithreaded and scalable fashion. Benchmark: 8 core 1M annotations for 2Gb sorted reads ~30 seconds compared to ~28 minutes for bedtools multicov. Files include: fast_count_multi - reports all counts and RPKM, multithreading support fast_count_deseq - reports gene counts in deseq compatible format, multithreading support fast_count - reports all counts with no multithreading support. usage ./fast_count_multi num_threads gtf_file bam_file(s) > output Requires bamtools API library at run time, and c++0x for compile. ...
    Downloads: 0 This Week
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  • 25

    CRISPR-Offinder

    a CRISPR guide RNA design and off-target searching to

    ...Therefore, there is an urgent need to develop a versatile tool to design sgRNA to satisfy the requirement of different RNA-guided DNA endonucleases. To this end, a flexible sgRNA design program named “CRISPR-offinder” was developed. The most important feature of this new program is that it supports all known PAM types, as well as the customer-defined PAM. Besides, CRISPR-offinder can find and rank the candidate sgRNAs in genome by off-target sites number, and also can be used to design single or paired-gRNAs. CRISPR-offinder is freely available as a command-line program or accessible via our website. ...
    Downloads: 0 This Week
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