Search Results for "/storage/emulated/0/android/data/net.sourceforge.uiq3.fx603p/files" - Page 77

Showing 4804 open source projects for "/storage/emulated/0/android/data/net.sourceforge.uiq3.fx603p/files"

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  • 1

    JCycles

    [frozen] A library for computing cycles in graphs or in Java code.

    [This project is frozen, but has an offspring with more features: https://github.com/jeffhain/jadecy ] JCycles provides treatments to compute cycles, or just strongly connected components, in directed graphs in general, or in classes or packages dependencies graphs parsed from class files (major version <= 51, else does best effort). It uses Tarjan's algorithm for SCCs, and Johnson's for cycles, with continuations instead of recursion, which allows to handle large graphs (< Integer.MAX_VALUE vertices). Requires Java 5 or later.
    Downloads: 0 This Week
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  • 2
    cy2fluxviz

    cy2fluxviz

    cy2fluxviz : Cytoscape 2 plugin for flux distribution visualization

    cy2fluxviz - Cytoscape 2 Plugin for the visualization of flux distributions in networks. Latest releases from https://github.com/matthiaskoenig/cy2fluxviz
    Downloads: 0 This Week
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  • 3
    Perl Bioinformatic Utility Tool I have development during the time I have to analysis Biology data.
    Downloads: 0 This Week
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  • 4
    xfer9860 works with the fx-9860G (AKA Graph85) versions of Casio's graphing calculators. It allows you to transfer files to your calculator, and works on platforms where libusb is available - including Linux and Windows.
    Downloads: 4 This Week
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  • 5

    EXCAVATOR-tool

    Tool for detecting CNVs from whole-exome sequencing data

    ...We recently published on BMC Genomics a novel software package, named XCAVATOR, for the identification of CNVs/CNAs from short and long reads whole-genome sequencing experiments (https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-017-4137-0). XCAVATOR is freely available at http://sourceforge.net/projects/xcavator/. EXCAVATOR is a novel software package for the detection of copy number variants (CNVs) from whole-exome sequencing data. EXCAVATOR has been published on Genome Biology (http://genomebiology.com/2013/14/10/R120/abstract). #################### ATTENTION!!!!! ...
    Downloads: 0 This Week
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  • 6

    cmotif

    A method for mining conditional phosphorylation motifs

    ...Although several algorithms have been proposed to uncover phosphorylation motifs, the problem of efficiently discovering a set of significant motifs with sufficiently high coverage and non-redundancy still remains unsolved. In this paper, we propose an algorithm called C-Motif for a non-redundant identification of significant phosphorylation motifs. In tests with real data including both non-kinase-specific and kinase-specific phosphorylation data, the C-Motif algorithm successfully reports a relatively complete set of of conditional phosphorylation motifs efficiently.
    Downloads: 0 This Week
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  • 7
    FALCON - Text Search Java Project

    FALCON - Text Search Java Project

    JSON based text search Java Project

    ----------------- - What is it? - ----------------- The "Falcon Search" is a JAVA API and tool to search inside the documents. It was originally started to search the content in pdf files under the project "HAWK Search". Searching with this tool is query-based not word-based as in most of the document search tools OR document readers. It also takes care of jumbling of words within query and spelling mistakes. Commonly used techniques in this project are Natural Language Processing, Information Extraction and Question-Answering Architecture. ---------------------- - Latest Version - ---------------------- Details of latest version can be found on project website - http://geekdadaji.com --------------------------- - CONTACT DETAILS - --------------------------- CREATOR : SWAPNIL A JADHAV (saj1919) EMAIL ID : dadajibudhau@gmail.com WEBSITE : http://geekdadaji.com LICENSE : CC BY-NC 4.0
    Downloads: 0 This Week
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  • 8
    Geomview

    Geomview

    an interactive 3D viewing program

    Geomview is an interactive 3D viewing program for Unix. Geomview lets you view and manipulate three- and higher-dimensional objects, and can also be used as a display engine by other programs to animate objects. Geomview supports OpenGL and uses a Motif X interface.
    Downloads: 19 This Week
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  • 9
    caplib

    caplib

    Correct, translate and analyze combinatorial library sequencing data

    Originally developped to handle PacBio CCS data for an AAV capsid library. This program will extract, correct, translate and analyze the sequencng data, starting from the CCS fastq file.
    Downloads: 0 This Week
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  • 10
    A math application written in Java. Its features include 2D and 3D graph plotting, scripting, user-defined variables and functions and skinnable GUI. This project is not maintained at the moment.
    Downloads: 0 This Week
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  • 11

    basecv

    BCV is DNA base caller with vocabulary

    The Base Calling with Vocabulary (BCV) software package is intended for analysis of direct (population) sequencing chromatograms using known vocabulary sequences similar to the target DNA. The current version of BCV can only process chromatogram files obtained on Applied Biosystems capillary sequencing machines (ABIF file format).
    Downloads: 0 This Week
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  • 12

    DimerRemover

    Remove adapter dimers from NGS data

    This program can be used to count or remove adapter dimers in fastq files. Using a provided adapter sequence, it generates variations of this sequence and stores them in a hash table. The reads can then be directly matched against the hash. It is far more time efficient than doing alignment.
    Downloads: 0 This Week
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  • 13
    FineSplice

    FineSplice

    Enhanced splice junction detection and estimation from RNA-Seq data

    FineSplice is a Python wrapper to TopHat2 geared towards a reliable identification of expressed exon junctions from RNA-Seq data, at enhanced detection precision with small loss in sensitivity. Following alignment with TopHat2 using known transcript annotations, FineSplice takes as input the resulting BAM file and outputs a confident set of expressed splice junctions with the corresponding read counts. Potential false positives arising from spurious alignments are filtered out via a semi-supervised anomaly detection strategy based on logistic regression. ...
    Downloads: 0 This Week
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  • 14

    NIKS

    NIKS (Needle in a K-stack) - detection of mutations in NGS data

    To get access to the code, please check it out with svn as described in the code section.
    Downloads: 0 This Week
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  • 15
    Cotovía

    Cotovía

    Text-to-Speech System for Galician and Spanish

    ...Cotovía has been developed as a research project, therefore most of the work has been focused on the most interesting aspects from a scientific point of view. Although the performance of the whole TTS system is quite good, there are some parts that could be clearly improved. Cotovia files and installing instructions are available at the Files and Git sections.
    Downloads: 15 This Week
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  • 16
    Displays four-dimensional objects and functions by projecting them into three-dimensional space. Viewpoint transformations and parameter changes are displayed in real time. THE PROJECT'S CODE BASE HAS BEEN MOVED TO GITHUB: https://github.com/lene/HyperspaceExplorer The Git repository on SourceForge will be kept in sync with GitHub at least for the time being, but for the latest commits you should check the GitHub Project. If you want to report a bug or a feature request, please use...
    Downloads: 0 This Week
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  • 17

    obstbaumpate

    Obstbaum Verwaltung

    Mit dem Obstbaumpaten lassen sich einfach Obstbäume an Wegesrändern verwalten.
    Downloads: 1 This Week
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  • 18

    Computing with units

    Calculator that takes care of measurement units.

    Java program for computations with values expressed in terms of physical or other units. Supports complicated mathematical expressions and user-defined functions. Invoked from scripts, line command, or as GUI. Extensive units data base.
    Downloads: 0 This Week
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  • 19

    SIMtoEXP

    For comparison of simulation and experimental scattering data

    SIMulation to EXPeriment is software that allows the direct comparison of simulation density information with that obtained from X-ray and neutron scattering experiments, by converting the simulation data to form factors. It also calculates volume probability distributions according to a space filling volumetric model. Written in C++ and Qt, SIMtoEXP has a very simple and easy to use GUI with interactive plotting. The software was originally developed by Norbert Kucerka. The code has been tested on OpenSUSE and Ubuntu (both binary and compilation); Windows and Mac are not officially supported, see the 'Notes' in the tar. ...
    Downloads: 0 This Week
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  • 20
    AWclust is easy to use non-parametric population structure analysis software written for R with a GUI interface. Just point and click and you will be on your way to discovering the important cluster information in your SNP data sets.
    Downloads: 0 This Week
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  • 21
    OpenCMISS-Zinc

    OpenCMISS-Zinc

    A Library for Interactive Modelling and Visualisation

    ...Models are represented in Zinc as mathematical fields defined over domains, including finite elements with support for high-order basis functions, complex parameter mappings and time variation, and image-based fields. Further fields can be defined by mathematical expressions and algorithms on existing fields, including image processing filters. Zinc model data structures are dynamic, supporting interactive applications which programmatically create, destroy and modify parts of models.
    Downloads: 6 This Week
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  • 22

    wepro

    A tiny app for getting the weather.

    ...This applet is designed specifically to utilize a diversity of modern Software Engineering best practices. We plan for this application to be open source, extensible, and reusable. We also plan for the weather app to utilize multiple data providers, or website urls that provide weather information freely, so that a user can chose which provider dynamically during the runtime of the application.
    Downloads: 0 This Week
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  • 23

    FoodPhysicsApplication

    A C# application for scientists in the area of physical chemistry

    The project has been created to develop a software that can help scientists in the area of physical chemistry with focus on foods data analysis tools that are currently mainly done by hand. In the first step, advanced analysis of texture analyzer compression data are provided and the project will be extended over time dependent on the time I can get to continue with it.
    Downloads: 0 This Week
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  • 24

    Cost-sensitive Classifiers

    Adaboost extensions for cost-sentive classification

    ...Decision Tree Moreover, Voting criteria is also required e.g. Minimum expected cost criteria Input also requires to load an arff file and a cost matrix (sample arff and cost files are uploaded for users' reference) This extension uses weka for classification and generates the classification model along with confusion matrix. For given dataset and cost matrix
    Downloads: 0 This Week
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  • 25

    DSOL

    DSOL: A Distributed Simulation Object Library implemented in Java

    DSOL is a full featured multi-formalism, distributed simulation environment developed at Delft University of Technology (The Netherlands). DSOL has support for discrete event and for continuous modeling. Formalisms supported are event scheduling, DEVS, flow-based simulation, and continuous modeling through sets of differential equations. The first release was introduced at IEEE's Winter Simulation Conference in 2002. Since then, numerous papers and PhD dissertations have been developed, with...
    Downloads: 0 This Week
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