Search Results for "git:/git.code.sf.net/p/docfetcher/code" - Page 10

Showing 1058 open source projects for "git:/git.code.sf.net/p/docfetcher/code"

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  • 1
    MATS is a computational tool to detect differential alternative splicing events from RNA-Seq data. The statistical model of MATS calculates the P-value and false discovery rate that the difference in the isoform ratio of a gene between two conditions exceeds a given user-defined threshold. From the RNA-Seq data, MATS can automatically detect and analyze alternative splicing events corresponding to all major types of alternative splicing patterns. MATS handles replicate RNA-Seq data from both paired and unpaired study design. ...
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    Downloads: 17 This Week
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  • 2

    FastaTools

    Performs several operations to Fasta protein databases

    FastaTools performs several operations to Fasta protein databases. For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/fastatools/code/ci/default/tree/README.md Or you can download the Documentation an Tutorial PDF file in the Files section: https://sourceforge.net/projects/fastatools.lp-csic-uab.p/files/FastaTools%20Documentation%20and%20Tutorials.pdf - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M., & Abian, J. (2014). ...
    Downloads: 0 This Week
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  • 3

    PHP-Module-Loader

    Simple PHP Module Loader Source Code

    This is an easy to use PHP-Module-Loader Script for any purpose. Future Versions may be more complex. This Version of the PHP-Module-Loader is the most simple. Have fun trying and don't forget to give some Feedback on my project pages. In Version 1.1 Final is absolute path given to avoid problems. The $_GET Variable is now escaped. Now you can try out the new namegenerator module with the PHP-Guestbook or with the PHP-Module-Loader You can get PHP-Modul-Loader @ GitHub:...
    Downloads: 0 This Week
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  • 4
    ScaffCC

    ScaffCC

    Compilation and optimization framework for the Scaffold language

    ScaffCC is a compiler and scheduler for the Scaffold programing language. It is written using the LLVM open-source infrastructure. It is for the purpose of writing and analyzing code for quantum computing applications. ScaffCC enables researchers to compile quantum applications written in Scaffold to a low-level quantum assembly format (QASM), apply error correction, and generate time and area metrics. It is written to be scalable up to problem sizes in which quantum algorithms outperform classical ones, and as such provide valuable insight into the overheads involved and possible optimizations for a realistic implementation on a future device technology.
    Downloads: 0 This Week
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  • 5
    Arduino MIDI Library

    Arduino MIDI Library

    MIDI for Arduino

    ...Overridable template-based settings. Create more than one MIDI interface for mergers/splitters applications. Use any serial port, hardware or software. All USB-related code has been moved into a separate repository Arduino-USB-MIDI, USB MIDI Device support with MIDI USB, still using this library to do all the MIDI heavy-lifting.
    Downloads: 0 This Week
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  • 6
    Jack LIRE (Linked Record)

    Jack LIRE (Linked Record)

    Quantum universal object system with referencing and genetics

    Jack LIRE (Linked Record) is a quantum database-backed life-long text record diary with referencing (linking) between records, and a data library for life-long keeping of files such as documents, photographs, music and more. The diary records are fully searchable. Files can be mentioned in diary records to preserve memories, document knowledge and ideas, and more. Massive numbers of diary records and files can be permanently kept. A database located on one computer can be accessed from...
    Downloads: 0 This Week
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  • 7
    PlanetPack

    PlanetPack

    Radial-velocity & transits analysis tool for exoplanets

    ...The description of the main theoretic concepts, statistical methods and algorithms that PlanetPack implements, is given in the following refereed papers: R.V. Baluev 2013, Astronomy & Computing, V. 2, P. 18 (initial release); R.V. Baluev 2018, Astronomy & Computing, V. 25, P. 221 (update 3.0). The technical manual explaining the details of the practical use is available in the download archive here (see the /doc/ subfolder).
    Downloads: 0 This Week
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  • 8

    Piko stats

    Piko solar inverter data communicator and manager

    Piko solar inverter interface. Get online real time data and status. Get also history data. Database management of data. Exports, graphs, ... Manage data and stats using a SQLite or MySQL database. Third party intergration. See the Wiki home page for more informations.
    Downloads: 1 This Week
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  • 9

    distlink

    Library to compute distance between elliptic orbits (MOID)

    ...It employs numeric error control and deals carefully with nearly degenerate cases (like almost circular and almost coplanar orbits). Library also includes auxiliary functions. The code was developed and tested with GCC, though it should be usable with any other C++-compatible compiler. See README.
    Downloads: 0 This Week
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  • 10
    Generic CAM
    A tool for CNC toolpath generation. Model data in, G-Codes out. The system is kept as generic as possible. Machines with up to 9 axis can be defined. Machine simulator included.
    Downloads: 0 This Week
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  • 11

    F3DM

    Finite Element Method on 3D Meshes

    f3dmlib is a FEM library that can read, write and analyse 3D tetrahedral meshes, minimize a given functional, and refine the resulting meshes. The minimization is parallelized with OpenMP. Three main features in unstable 1.8.x version (available via GIT): quadratic elements, periodic boundary conditions, and the solver for scalar and electromagnetic wave equations. f3dmgeom is a collection of a few simple tools for creating surface meshes for tetgen. It can handle simple geometries only.
    Downloads: 0 This Week
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  • 12
    Ganja.js

    Ganja.js

    Javascript Geometric Algebra Generator for Javascript, c++

    ...The generated code provides in a flat multivector format and operator overloading.
    Downloads: 0 This Week
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  • 13
    ObjectVolume

    ObjectVolume

    Calculates Volume, Surface Area & Centroid of a Closed Triangular Mesh

    The ObjectVolume program calculates the volume, surface area and centroid of a closed triangular mesh represented in an object file (.obj). The process goes through the list of triangles that make up the surface and, for each triangle, forms a tetrahedron with an external point. The program uses the origin (0,0,0). The volume of the tetrahedron is then calculated. Tetrahedrons with back facing triangles are added and those with forward facing triangles are subtracted yielding the object...
    Downloads: 0 This Week
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  • 14
    AdaAutoDiff

    AdaAutoDiff

    C++ Templates and Ada Package for Automatic Differentiation

    Operators are overloaded so that a normal looking function definition provides access to not only evaluations of itself, but to evaluations of any of its analytic derivatives. Automatic differentiation means the user does not need to define the analytic expressions for all the various partial derivatives. It also means that those complex expressions are essentially calculated at compile time, and merely evaluated at runtime. First order derivatives only, forward...
    Downloads: 2 This Week
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  • 15
    EasyNetVars

    EasyNetVars

    Data Exchange between CoDeSys Devices and .NET via Network Variables

    Library (.DLL) for Data Exchange between CoDeSys Devices and .NET and Step 7 via Network-Variables written in C# V1.0: Bugfixes New 02/2015: Read and Write Operations possible for more than 255 byte. - Read and Write Operations CoDeSys -> .NET - Method to create .GVL-File to import in CoDeSys Example in Step 7 (TIA-Portal) for Data-exchange between CoDeSys and Siemens S7 Devices CoDeSys -> Step7 (S7-1200): https://sourceforge.net/projects/easynetvars/files/NetVarsStep7/ See...
    Downloads: 2 This Week
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  • 16

    PsPM

    A matlab suite for Psycho-Physiological Modelling

    ...It includes linear convolution models and non-linear models for SCR, and allows for modelling of other signals, too. A flexible import interface and many utilities make this software a standalone tool. IMPORTANT: As of 04.11.2019, the official code repository for PsPM has been moved to https://github.com/bachlab/PsPM . In order to check the latest releases, discussion and bug reports, please refer to our new repository. Although this website will maintained to provide further releases, there will be no active development on the SVN repository. Thank you for your understanding and for using PsPM.
    Downloads: 1 This Week
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  • 17
    dBEAST

    dBEAST

    digest BEAST

    This code has been used in the study: Distinct rates and patterns of spread of the major HIV-1 subtypes in Central and East Africa; PLoS Pathogens 2019 https://journals.plos.org/plospathogens/article?id=10.1371/journal.ppat.1007976 Please note that the code includes test input data that does not necessarily reproduce the results included in the manuscript.
    Downloads: 0 This Week
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  • 18
    Open Location Code

    Open Location Code

    A library to generate short codes

    Plus Codes are like street addresses for people or places that don’t have one. Instead of addresses with street names and numbers, Plus Codes are based on latitude and longitude and displayed as numbers and letters. With a Plus Code, people can receive deliveries, access emergency and social services, or just help other people find them. Plus Codes technology is open source and free to create and use. They are much shorter than traditional global coordinates, so they’re easy to share. Plus Codes work whether you’re online or offline, you don’t need an internet connection. ...
    Downloads: 0 This Week
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  • 19
    Bridge Designer and Contest

    Bridge Designer and Contest

    A national virtual bridge engineering contest for kids of all ages.

    Bridge Designer has been replaced with the web app ASCE Bridge Designer, Cloud Edition. Binaries posted here will go away on 1 July 2026. The source repo will remain. A national virtual bridge engineering contest with prizes for middle and high school kids, grades 6 to 12, but anyone can enter for fun. Based on the award-wining Bridge Designer client software, now open source through this project. Web site infrastructure supports worldwide participation in qualifying and semifinal rounds...
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    Downloads: 2,419 This Week
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  • 20
    An open source framework for LC-MS based proteomics and metabolomics. OpenMS offers data structures and algorithms for the processing of mass spectrometry data. The library is written in C++. Our source code and wiki lives on GitHub (https://github.com/OpenMS/OpenMS).
    Downloads: 6 This Week
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  • 21

    64-bit prime test

    Test 64-bit integers for pribality. Miller-Rabin, Lucas. BPSW

    The code here tests 64-bit integers for primality. For 32-bit values it uses hashing and then a single Miller-Rabin test. As values get larger it uses up to two more Miller Rabin rounds, and at the end it uses BPSW (which is one rould of Miller Rabin and then one of Lucas). Compared to other codes that achieve the same I believe that the hash tables used here are compact, and both the programs and the intermediate data used to create them are provided.
    Downloads: 0 This Week
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  • 22
    GFS view

    GFS view

    GFS view is the program for generate and display weather forecas

    GFS view is the program to generate and display weather forecast maps from the National Centers for Environmental Prediction (NCEP) GFS data Quick and easy access to instant weather forecast data of the NCEP center Download many data sets at once: by several days, many issued time and many forecast times, by the variable time step and any combinations of grib code-level-heights Filter data on the server to save bandwidth, downloading time and a disk space, extensive set of parameters of the NCEP filter tool is implemented Wise grib file loading: a grib file is treated as a sequence of the code-level-height planes, loaded separately. So they have different attributes like ramp color tables Straightforward GIS approach to vector overlays, standard ESRI Shape is used for geography attributes of the surface, orography and so on. ...
    Downloads: 1 This Week
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  • 23
    Pydicom by examples

    Pydicom by examples

    Basic and intermediate examples of DICOM library with Jupyter

    Basic and intermediate examples to read, modify and write DICOM files with Python code using Jupyter - To install Jupyter - https://jupyter.org/install ====== All examples are based on Pydicom. An open source library - https://pydicom.github.io/
    Downloads: 0 This Week
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  • 24
    NUT Nutrition Software

    NUT Nutrition Software

    nutrition software to record and analyze what you eat

    nut is nutrition software to record what you eat and analyze your meals for nutrient composition. The emphasis is on personal dietary experimentation to determine the best possible diet. The software uses SQLite for a portable, os-independent application.
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    Downloads: 11 This Week
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  • 25
    CS Books

    CS Books

    Computer Science Books

    Computer science books computer technology books PDF. The books in this warehouse come from the Internet, and the copyright belongs to the original author. It is not for profit, but only for learning and use.
    Downloads: 0 This Week
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