Search Results for "/storage/emulated/0/android/data/net.sourceforge.uiq3.fx603p/files" - Page 10

Showing 1243 open source projects for "/storage/emulated/0/android/data/net.sourceforge.uiq3.fx603p/files"

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  • 1
    ...Karpievitch YV, Taverner T, Adkins JN, Callister SJ, Anderson GA, Smith RD, Dabney AR. Bioinformatics 2009 2) "Metabolomics data normalization with EigenMS" Karpievitch YV, Nikolic SB, Wilson R, Sharman JE, Edwards LM. PLoS One 2014
    Downloads: 0 This Week
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  • 2
    Specify Software

    Specify Software

    Biodiversity Database Platform

    ...National Science Foundation and the State of Kansas. A web browser application, Specify 7, is available on GitHub. In 2015, 450 biological collections worldwide use Specify Software for collections data management. An iPad app, Specify Insight is also available.
    Downloads: 0 This Week
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  • 3
    gogadget

    gogadget

    A toolbox for interpretation and visualization of RNA-seq GO analysis

    gogadget is an R package, and can help with the visualization and interpretation of GO enrichment analysis of RNA-seq data. It is developed especially for the use in combination with goseq. The functions that are available in this package are extensively described in the user's guide. To install the package download the "gogadget_2.1.tar.gz" file, open R and install with the following line: install.packages( "C:/your/directory/gogadget_2.1.tar.gz", repos = NULL, type="source") The package was made in R 3.4.2 on a Windows 7 computer, and is also tested on Ubuntu. ...
    Downloads: 0 This Week
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  • 4
    RDML-Ninja is an editor for qPCR data. It is the reference implementation for the RDML data standard allowing to visualize, edit and reanalyze qPCR data.
    Downloads: 3 This Week
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  • 5
    datasw

    datasw

    datasw, a tool for rapid processing of HPLC-SAXS data.

    Small-angle X-ray scattering (SAXS) in solution is a common low-resolution method which can efficiently complement high-resolution information obtained by crystallography or NMR. Sample monodispersity is key to reliable SAXS data interpretation and model building. Beamline setups with inline high-performance liquid chromatography (HPLC) are particularly useful for accurate profiling of heterogeneous samples. The program DATASW performs averaging of individual data frames from HPLC-SAXS experiment using a sliding window of a user-specified size, calculates overall parameters (I(0), Rg, Dmax and MW) and predicts the folding state (folded/unfolded) of the sample. ...
    Downloads: 0 This Week
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  • 6

    The Wily DNA Editor

    a tool to master DNA sequences, plasmids and restriction digests

    ...The main idea is to install nothing but start cloning. Here we handle the development and the bug reports. The Wiley DNA Editor can be used from our homepage - or the files available in the download section.
    Downloads: 0 This Week
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  • 7
    MAT-MECAS

    MAT-MECAS

    Cell impedance analysis software.

    ...The calculations are based on a FFT deconvolution procedure and on approximation of the reconstructed currents with a theoretical function. The impulse response of the signal path is necessary for the calculations. Read manual first! For testing MAT-MECAS we provide a sample data along with sample stimulation protocols.
    Downloads: 0 This Week
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  • 8
    CvMob
    CvMob is an Open Source tool to automatic visual analysis of human movement. The software calculates the optical flow to generate data about trajectory, velocity and acceleration using low-quality videos. For more informations, please visit our website: http://www.cvmob.ufba.br/
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    Downloads: 13 This Week
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  • 9
    pteros
    ...New project page: https://github.com/yesint/pteros New documentation page: https://yesint.github.io/pteros/ Pteros is the C++ library for custom molecular modeling and simulations codes designed for researchers, not for C++ gurus. Provides facilities for PDB, XTC and TRR files IO, powerful selections, geometry transformations, RMSD fitting and alignment, etc.
    Downloads: 0 This Week
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  • 10
    nmr-nessy

    nmr-nessy

    NMR relaxation dispersion spectroscopy analysis software

    NESSY is an open source software to analyse NMR relaxation dispersion data of either CPMG or R1p (R1rho) dispersion experiments. The graphical interface enables simple management of large experimental data sets and simple and automated analysis. NESSY automatically calculates effective transverse relaxation rate (R2eff) and performs model selection between different relaxation dispersion models.
    Downloads: 0 This Week
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  • 11
    Next-generation data pipeline to statistically call methylated and differentially methylated loci See the manual in doc/manual.pdf Please note: Calling of (differentially) methylated _positions_ will soon be uploaded.
    Downloads: 0 This Week
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  • 12

    MOIRAI

    Simple Scientific Workflow System for CAGE Analysis

    ...After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project. MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data. MOIRAI has a graphical interface allowing wet-lab researchers to create, modify and run analysis workflows. Embedded within the workflows are graphical quality control indicators allowing users assess data quality and to quickly spot potential problems. MOIRAI package comes with three main workflows allowing users to map, annotate and perform an expression analysis over multiple samples.
    Downloads: 0 This Week
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  • 13
    CSBB-v2.0

    CSBB-v2.0

    Computational Suite for Bioinformaticians and Biologists

    CSBB is a command line based bioinformatics suite to analyze biological data acquired through varied avenues of biological experiments. CSBB is implemented in Perl, while it also leverages the use of R, java and ruby in background for specific modules. Major focus of CSBB is to allow users from biology and bioinformatics community, to get benefited by performing down-stream analysis tasks while eliminating the need to write programming code.
    Downloads: 0 This Week
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  • 14
    Simulation Experiment Description ML
    The Simulation Experiment Description Markup Language (SED-ML) is a formal representation aimed at encoding requirements defined in the MIASE guidelines. THIS REPOSITORY IS DEPRECATED AND MOVED TO https://github.com/sed-ml
    Downloads: 0 This Week
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  • 15
    Software for visualizing and interpreting NMR data, with an emphasis on metabolomics. Go to the rNMR homepage at http://rnmr.nmrfam.wisc.edu for more details.
    Downloads: 0 This Week
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  • 16
    Jillion
    Java bio-informatics library to analyze and convert genomic sequence and assembly data. This library was created and used by the J. Craig Venter Institute (JCVI)
    Downloads: 0 This Week
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  • 17

    spectralHMM

    A spectral method for inferring selection from time series data

    ...This software implements the algorithms described in the following paper: Steinrücken, M., Bhaskar, A. and Song, Y.S. A novel spectral method for inferring general diploid selection from time series genetic data. Annals of Applied Statistics, Vol. 8, No. 4 (2014) 2203-2222
    Downloads: 0 This Week
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  • 18
    MSqBAT

    MSqBAT

    Label-free protein quantification for LC-MS

    MSqBAT is a freely-available all-platform software application for label-free quantification of proteins from LS-MS data. It was developed in the lab of Dr. Christoph Rösli at the Heidelberg Institude for Stem Cells and Experimental Medicine (HI-STEM) and the German Cancer Research Center (DKFZ). It’s main features are 1) Label-free, MS1-based quantification 2) Support both LC-MALDI-MS- as well as LC-ESI-MS data 3) Supports both GeLC-MALDI-MS- and GeLC-ESI-MS data 4) Convenient, graphical user interface Acknowledgements The development of MSqBAT is kindly supported by YourKit Java Profiler.
    Downloads: 0 This Week
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  • 19
    Maui

    Maui

    Maui is the Maltcms User Interface

    Maui is the Maltcms User Interface, a rich client application for Chromatography-Mass Spectrometry and related research areas.
    Downloads: 0 This Week
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  • 20
    ImagingAnalysis

    ImagingAnalysis

    Direct tissue-level image quantification package for Mathematica

    ImagingAnalysis is a Mathematica package that performs grid-based analysis of time-lapse imaging data saved in a sequence of TIFF files. This package requires Mathematica 7.0. Revised on 14 May 2017: Bugs are fixed and incompatibility issues are resolved. The current version runs on Mathematica 11.
    Downloads: 1 This Week
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  • 21

    fourSig

    Analyze 4C-seq data.

    fourSig is a suite of programs for analyzing and visualizing 4C-seq data.
    Downloads: 0 This Week
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  • 22
    RoadRunner represents a state-of-the-art simulation library for SBML models. It is fast, portable and accurate. This projects hosts the library and tools using the library.
    Downloads: 0 This Week
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  • 23
    Community-based development of the Vaccine Ontology (VO) to standardize vaccine annotation, integrate various vaccine data, and support computer-assisted reasoning.
    Downloads: 0 This Week
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  • 24
    BOWS

    BOWS

    Bioinformatics Open Web Services

    ...BOWS is called from the front-end by Web Services, therefore a program running in a simple computer can benefit of high performance computation executed elsewhere. doi:10.1186/s13104-015-1190-0
    Downloads: 0 This Week
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  • 25

    Seqping

    Gene Prediction Pipeline for Plant Genomes

    Gene Prediction Pipeline for Plant Genomes using Self-Training Gene Models and Transcriptomic Data
    Downloads: 0 This Week
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