Search Results for "/storage/emulated/0/android/data/net.sourceforge.uiq3.fx603p/files" - Page 57

Showing 3440 open source projects for "/storage/emulated/0/android/data/net.sourceforge.uiq3.fx603p/files"

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  • 1
    caplib

    caplib

    Correct, translate and analyze combinatorial library sequencing data

    Originally developped to handle PacBio CCS data for an AAV capsid library. This program will extract, correct, translate and analyze the sequencng data, starting from the CCS fastq file.
    Downloads: 0 This Week
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  • 2
    A math application written in Java. Its features include 2D and 3D graph plotting, scripting, user-defined variables and functions and skinnable GUI. This project is not maintained at the moment.
    Downloads: 0 This Week
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  • 3
    FineSplice

    FineSplice

    Enhanced splice junction detection and estimation from RNA-Seq data

    FineSplice is a Python wrapper to TopHat2 geared towards a reliable identification of expressed exon junctions from RNA-Seq data, at enhanced detection precision with small loss in sensitivity. Following alignment with TopHat2 using known transcript annotations, FineSplice takes as input the resulting BAM file and outputs a confident set of expressed splice junctions with the corresponding read counts. Potential false positives arising from spurious alignments are filtered out via a semi-supervised anomaly detection strategy based on logistic regression. ...
    Downloads: 0 This Week
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  • 4

    basecv

    BCV is DNA base caller with vocabulary

    The Base Calling with Vocabulary (BCV) software package is intended for analysis of direct (population) sequencing chromatograms using known vocabulary sequences similar to the target DNA. The current version of BCV can only process chromatogram files obtained on Applied Biosystems capillary sequencing machines (ABIF file format).
    Downloads: 0 This Week
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  • 5

    DimerRemover

    Remove adapter dimers from NGS data

    This program can be used to count or remove adapter dimers in fastq files. Using a provided adapter sequence, it generates variations of this sequence and stores them in a hash table. The reads can then be directly matched against the hash. It is far more time efficient than doing alignment.
    Downloads: 0 This Week
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  • 6

    obstbaumpate

    Obstbaum Verwaltung

    Mit dem Obstbaumpaten lassen sich einfach Obstbäume an Wegesrändern verwalten.
    Downloads: 1 This Week
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  • 7
    OpenCMISS-Zinc

    OpenCMISS-Zinc

    A Library for Interactive Modelling and Visualisation

    ...Models are represented in Zinc as mathematical fields defined over domains, including finite elements with support for high-order basis functions, complex parameter mappings and time variation, and image-based fields. Further fields can be defined by mathematical expressions and algorithms on existing fields, including image processing filters. Zinc model data structures are dynamic, supporting interactive applications which programmatically create, destroy and modify parts of models.
    Downloads: 7 This Week
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  • 8

    Computing with units

    Calculator that takes care of measurement units.

    Java program for computations with values expressed in terms of physical or other units. Supports complicated mathematical expressions and user-defined functions. Invoked from scripts, line command, or as GUI. Extensive units data base.
    Downloads: 0 This Week
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  • 9

    SIMtoEXP

    For comparison of simulation and experimental scattering data

    SIMulation to EXPeriment is software that allows the direct comparison of simulation density information with that obtained from X-ray and neutron scattering experiments, by converting the simulation data to form factors. It also calculates volume probability distributions according to a space filling volumetric model. Written in C++ and Qt, SIMtoEXP has a very simple and easy to use GUI with interactive plotting. The software was originally developed by Norbert Kucerka. The code has been tested on OpenSUSE and Ubuntu (both binary and compilation); Windows and Mac are not officially supported, see the 'Notes' in the tar. ...
    Downloads: 0 This Week
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    The top-rated AI recruiting platform for faster, smarter hiring.

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  • 10
    AWclust is easy to use non-parametric population structure analysis software written for R with a GUI interface. Just point and click and you will be on your way to discovering the important cluster information in your SNP data sets.
    Downloads: 0 This Week
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  • 11

    wepro

    A tiny app for getting the weather.

    ...This applet is designed specifically to utilize a diversity of modern Software Engineering best practices. We plan for this application to be open source, extensible, and reusable. We also plan for the weather app to utilize multiple data providers, or website urls that provide weather information freely, so that a user can chose which provider dynamically during the runtime of the application.
    Downloads: 0 This Week
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  • 12

    FoodPhysicsApplication

    A C# application for scientists in the area of physical chemistry

    The project has been created to develop a software that can help scientists in the area of physical chemistry with focus on foods data analysis tools that are currently mainly done by hand. In the first step, advanced analysis of texture analyzer compression data are provided and the project will be extended over time dependent on the time I can get to continue with it.
    Downloads: 0 This Week
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  • 13

    DSOL

    DSOL: A Distributed Simulation Object Library implemented in Java

    DSOL is a full featured multi-formalism, distributed simulation environment developed at Delft University of Technology (The Netherlands). DSOL has support for discrete event and for continuous modeling. Formalisms supported are event scheduling, DEVS, flow-based simulation, and continuous modeling through sets of differential equations. The first release was introduced at IEEE's Winter Simulation Conference in 2002. Since then, numerous papers and PhD dissertations have been developed, with...
    Downloads: 1 This Week
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  • 14

    Cost-sensitive Classifiers

    Adaboost extensions for cost-sentive classification

    ...Decision Tree Moreover, Voting criteria is also required e.g. Minimum expected cost criteria Input also requires to load an arff file and a cost matrix (sample arff and cost files are uploaded for users' reference) This extension uses weka for classification and generates the classification model along with confusion matrix. For given dataset and cost matrix
    Downloads: 0 This Week
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  • 15

    TrackArt

    GUI for diffusion simulation and SMT data analysis

    TrackArt is a simple MATLAB GUI for single particle tracking data analysis and simulation.
    Downloads: 0 This Week
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  • 16

    Cylindrical BLAST Viewer

    Alignments in Rotating Cylinder / 3D

    3D viewer which arranges BLAST hits and other bioinformatics-related alignments in a rotating, cylindrical display. Feedback appreciated. NOTE: requires Java3d installation. Superceded by Cylindrical Alignment App
    Downloads: 0 This Week
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  • 17

    Handwritten Signature SDK

    Java SDK useful to develop handwritten signature verification app

    Handwritten Signature SDK supports: dynamic time wrapping (DTW), extended regression (ER), signature sampling, direction hash and features extraction: see wiki for more info.
    Downloads: 0 This Week
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  • 18
    Pyphant is a framework for scientific data analysis. It features a flexible plugin architecture allowing for the application in many different fields. For the analysis a graph of processing steps is constructed, that can be applied via the cli as well.
    Downloads: 0 This Week
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  • 19
    NanocalcFX

    NanocalcFX

    Open Source Data Evaluation Software

    NanocalcFX is a free and open source evaluation software for a simple yet comfortable solution to deal with thousands of transport kinetics measured with a fluorescence microscope or similar kinetics. Data can be imported from CSV or Excel files or using the dedicated image stack analyser (NISA). You can get sample data at the nanocalcFX homepage. Note that nanocalcFX is currently in a beta state.
    Downloads: 0 This Week
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  • 20
    gpsman

    gpsman

    GPS Manager (GPSMan): a manager of GPS data

    GPS Manager (GPSMan) is a graphical manager of GPS data that makes possible the preparation, inspection and edition of GPS data in a friendly environment. GPSMan can also be used in command mode (with no graphical interface)
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    Downloads: 0 This Week
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  • 21

    SPE Toolbox

    MatLab functions for reading WinView/WinSpec .spe files

    This toolbox is a collection of MatLab functions for reading WinView/WinSpec files (.spe extension) directly to MatLab. It provides functions for reading full header from file into a structure, reading frames into matrices, and reading pixel values across all frames. You can use these functions to analyse and process experiment data stored in .spe files in MatLab, and to write functions to export .spe files to animated GIFs for use in presentations.
    Downloads: 0 This Week
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  • 22
    binary Turing Machine

    binary Turing Machine

    A Turing Machine Simulator

    Free binary Turing Machine simulator with a graphical user interface and possibility to save your files. Language : French (no translation available)
    Downloads: 0 This Week
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  • 23

    ldi

    Lucene Oracle Integration using Data Cartridge API

    Lucene Domain Index is full integration of Lucene project running inside the Oracle database using Oracle JVM. The integration provides a transparent detection of row data changes and an SQL layer for doing search.
    Downloads: 0 This Week
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  • 24

    hiovit-A

    hiovit-A is a simple yet flexible data visualization tool

    hiovit-A, a higher order visualization tool for AP-MS which generates intuitive circular diagrams for visually appealing final representation of AP-MS data. Hiovit-A can be used to compare a) different AP-MS datasets of various baits or b) a particular bait under various perturbations (lenticular section hiovit-a). The output of hiovit-A is a simple and intuitively easy to grasp visualization of a complex dataset. Previously known as PIVOT (Protein Interaction Visualization and Observation Tool)
    Downloads: 0 This Week
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  • 25
    The CM Engine translates digital images of rectangular plates that contain gridded colonies into quantitative data. It currently contains 3 analysis modes to ensure accurate measurements no matter how cells are deposited onto the agar.
    Downloads: 1 This Week
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